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2018
Widespread optogenetic expression in macaque cortex obtained with MR-guided, convection enhanced delivery (CED) of AAV vector to the thalamus
Authors: Yazdan-Shahmorad, A., Tian N., Kharazia V., Samaranch L., Kells A., Bringas J., He J., Bankiewicz K., Sabes P.N. Thalamo-cortical projection study by adeno-associated virus convention-enhanced delivery: large-scale optogenetic expression in the primate brain - Methods
Yazdan-Shahmorad, A., Tian N., Kharazia V., Samaranch L., Kells A., Bringas J., He J., Bankiewicz K., Sabes P.N. - 2018
An improved procedure for integrated behavioral z-scoring illustrated with modified Hole Board behavior of male inbred laboratory mice
Authors: Labots, M., Laarakker M.C., Schetters D., Arndt S.S., van Lith H.A. Calculating integrated z-scores to measuring mouse behavior - Methods
Labots, M., Laarakker M.C., Schetters D., Arndt S.S., van Lith H.A. - 2018
Personality biomarkers of pathological gambling: a machine learning study
Authors: Cerasa, A., Lofaro D., Cavedini P., Martino I., Bruni A., Sarica A., Mauro D., Merante G., Rossomanno I., Rizzuto M., Palmacci A., Aquino B., De Fazio P., Perna G.R., vanni E., Olivadese G., Conforti D., Arabia G., Quattrone A. Grambling disease personality biomarkers - Methods
Cerasa, A., Lofaro D., Cavedini P., Martino I., Bruni A., Sarica A., Mauro D., Merante G., Rossomanno I., Rizzuto M., Palmacci A., Aquino B., De Fazio P., Perna G.R., vanni E., Olivadese G., Conforti D., Arabia G., Quattrone A. - 2018
A new rat-compatible robotic framework for spatial navigation behavioral experiments
Authors: Gianelli, S., Harland B., Fellous J.-M. Robotic framework for rat spatial navigation analysis - Methods
Gianelli, S., Harland B., Fellous J.-M. - 2018
Automatic delineation of brain regions on MRI and PET images from the pig
Authors: Villadsen, J., hansen H.D., Jorgensen L.M., Keller S.H., Andersen F.L., Petersen I.N., Knudsen G.M., Svarer C. Magnetic resonance imaging and positron emission tomography to identify pig brain atlas - Methods
Villadsen, J., hansen H.D., Jorgensen L.M., Keller S.H., Andersen F.L., Petersen I.N., Knudsen G.M., Svarer C. - 2018
Automated immunohistochemical method to analyze large areas of the human cortex
Authors: Abbass, M., Trought K., Long D., Semechko A., Wong A.H.C. Post-mortem automated immunohistochemical method to analyze human cortex - Methods
Abbass, M., Trought K., Long D., Semechko A., Wong A.H.C. - 2018
3-D motion capture for long-term tracking of spontaneous locomotor behaviors and circadian sleep/wake rhythms in mouse
Authors: Sourioux, M., Bestaven E., Guillaud E., Bertrand S., Cabanas M., Milan L., Mayo W., Garret M., Cazalets J.-R. Circadian locomotion and slee/wake long-term recording in mice - Methods
Sourioux, M., Bestaven E., Guillaud E., Bertrand S., Cabanas M., Milan L., Mayo W., Garret M., Cazalets J.-R. - 2018
Simplified adaptor for stereotaxic surgery in non-human primates
Authors: Kim, H.-S., Byun D., Kim R.G., Kang G.-H., Park J.-Y., Yang Y.-S., Han S.-C., Kim H.-I. Sterotaxic surgery adaptor for non-human primates - Methods
Kim, H.-S., Byun D., Kim R.G., Kang G.-H., Park J.-Y., Yang Y.-S., Han S.-C., Kim H.-I. - 2018
The honeycomb maze provides a novel test to study hippocampal-dependent spatial navigation
Authors: Wood, R.A., Bauza M., Krupic J., Burton S., Delekate A., Chan D., O'Keefe J. New maze to test spatial navigation ability in rats - Methods
Wood, R.A., Bauza M., Krupic J., Burton S., Delekate A., Chan D., O'Keefe J. - 2018
Live imaging of neurogenesis in the adult mouse hippocampus
Authors: Pilz, G.-A., Bottes S., Betizeau M., Jorg D.J., Carta S., Simons B.D., Helmchen F., Jessberger S. Hippocampal neurons adult neurogenesis live imaging in mice - Methods
Pilz, G.-A., Bottes S., Betizeau M., Jorg D.J., Carta S., Simons B.D., Helmchen F., Jessberger S. - 2018
Toward an optically controlled brain
Authors: Feliu, N., Neher E., Parak W.J. Optical non invasive deep brain stiumulation technology - Methods - Commentary
Feliu, N., Neher E., Parak W.J. - 2018
Near-infrared deep brain stimulation via upconversion nanoparticle-mediated optogenetics
Authors: Chen, S., Weitemier A.Z., Zeng X., He L., Wang X., Tao Y., Huang A.J.Y., Hashimotodani Y., Kano M., Iwasaki H., Parajuli L.K., Okabe S., Teh D.B.L:, All A.H., Tsutsui-Kimura I., Tanaka K.F., Liu X., McHugh T.J. Optogenetic transcranial near infrared light deep brain neuron stimulation in mice: ventral tegmental area and hippocampus exemples - Methods
Chen, S., Weitemier A.Z., Zeng X., He L., Wang X., Tao Y., Huang A.J.Y., Hashimotodani Y., Kano M., Iwasaki H., Parajuli L.K., Okabe S., Teh D.B.L:, All A.H., Tsutsui-Kimura I., Tanaka K.F., Liu X., McHugh T.J. - 2018
Generation of a whole-brain atlas for the cholinergic system and mesoscopic projectome analysis of basal forebrain cholinergic neurons
Authors: Li, X., Yu B., Sun Q., Zhang Y., Ren M., Zhang X., Li A., Yuan J., Madisen L., Luo Q., Zeng H., Gong H., Qiu Z. Genetically labeled cholinergic neurons whole-brain map in mice - Methods
Li, X., Yu B., Sun Q., Zhang Y., Ren M., Zhang X., Li A., Yuan J., Madisen L., Luo Q., Zeng H., Gong H., Qiu Z. - 2018
Wireless optoelectromnic photometers for monitoring neuronal dynamics in the deep brain
Authors: Lu, L., Gutruf P., Xia L., Bhatti D.L., Wang X., Vazquez-Guardado A., Ning X., Shen X., Sang T., Ma R., Pakeltis G., Sobczak G., Zhang H., Seo D., Xue M., Yin L., Chanfa D., Sheng X., Bruchas M.R., Rogers J.A. Genetically encoded calcium indicator wireless photometry device stimulation and recording in small rodents: basolateral amygdala role in animal behavior demonstration - Methods
Lu, L., Gutruf P., Xia L., Bhatti D.L., Wang X., Vazquez-Guardado A., Ning X., Shen X., Sang T., Ma R., Pakeltis G., Sobczak G., Zhang H., Seo D., Xue M., Yin L., Chanfa D., Sheng X., Bruchas M.R., Rogers J.A. - 2018
Extracting information from the shape and spatial distribution of evoked potentials
Authors: Lopes-dos-Santos, V., Rey H.G., Navajas J., Quiroga R.Q. Wavelet decomnposition in cortical evoked potential analysis - Methods
Lopes-dos-Santos, V., Rey H.G., Navajas J., Quiroga R.Q. - 2018
Automatic quantification of juvenile zebrafish aggression
Authors: Gutierrez, H.C., Vacca I., Pons A.I., Norton W.H.J. Locomotion/aggression automatic quantification in zebrafishes - Methods
Gutierrez, H.C., Vacca I., Pons A.I., Norton W.H.J. - 2018
Functional network stability and average minimal distance - A framework to rapidly assess dynamics of functional netwrok representations
Authors: Wu, J., Skilling Q.M., Maruyama D., Li C., Ognjanovski N., Aton S., Zochowski M. Brain functional network connectivity extimation - Methods
Wu, J., Skilling Q.M., Maruyama D., Li C., Ognjanovski N., Aton S., Zochowski M. - 2018
The transgenic mouse line Igsf9-eGFP allowa targeted stimulation of inferior olive efferents
Authors: Patz, C., Brachtendorf S., Eilers J. Igsf9-eGFP transgenic mouse model to cerebellar inferior olive efferents study - Methods
Patz, C., Brachtendorf S., Eilers J. - 2018
A spherical treadmill system to train head-fixed adult rats
Authors: Fernandez, A.M.M.M., Burman A., Caceres A.I.M., Mininni C.J., Zanutto B.S., Lew S.E. Spherical treadmill system to motor task estimation in head-fixed rats - Methods
Fernandez, A.M.M.M., Burman A., Caceres A.I.M., Mininni C.J., Zanutto B.S., Lew S.E. - 2018
A single channel sleep-spindle detector based on multivariate classification of EEG epochs: MUSSDET
Authors: Lachner-Piza, D., Epitashvili N., Schulze-Bonhage A., Stieglitz T., Jacobs J., Dumpelmann M. Automated electroencephalogram signal processing in humans - Methods
Lachner-Piza, D., Epitashvili N., Schulze-Bonhage A., Stieglitz T., Jacobs J., Dumpelmann M. - 2018
Reconstructung the functional connectivity of multiple spike trains using Hawkes models
Authors: Lambert, R.C., Tuleau-Malot C., Bessaih T., Rivoirard V., Bouret Y., Leresche N., Reynaud-Bouret P. Hawkes model simultaion in brain functional connectivity reconstruction: "life integrate and fire" system - Methods
Lambert, R.C., Tuleau-Malot C., Bessaih T., Rivoirard V., Bouret Y., Leresche N., Reynaud-Bouret P. - 2018
Combining behavior and EEG analysis for exploration of dynamic effects of ADHD treatment in animal models
Authors: Jurica, P., Struzik Z.R., Li J., Horiuchi M., Hiroyama S., Takahara Y., Nishitomi K., Ogawa K., Cichocki A. Electroencephalographic recording and daily activity combination analysis in rodents - Methods
Jurica, P., Struzik Z.R., Li J., Horiuchi M., Hiroyama S., Takahara Y., Nishitomi K., Ogawa K., Cichocki A. - 2018
The M-maze task: an automated method for studying fear memory in rats exposed to protracted aversive conditioning
Authors: Souza, R.R., Robertson N.M., Pruitt D.T., Noble L., Meyers E.C., Gonzalez P.A., Bleker N.P., Carey H.L., Hays S.A., Kilgard M.P., McIntyre C.K., Rennaker R.L. Prolonged operant rewarded/aversive conditioning on exploratory activity, social interaction and startle reflex in rats: stress and fear memory measurement method - Methods
Souza, R.R., Robertson N.M., Pruitt D.T., Noble L., Meyers E.C., Gonzalez P.A., Bleker N.P., Carey H.L., Hays S.A., Kilgard M.P., McIntyre C.K., Rennaker R.L. - 2018
Association indices for quantifying social relationships: how to deal with missing observations of individuals or groups
Authors: Hoppitt, W.J.E., Farine D.R. Animal social network extimation analysis - Methods
Hoppitt, W.J.E., Farine D.R. - 2018
Identifying medical diagnoses and treatable diseases by image-based deep learning
Authors: Kermany, D.S., Goldbaum M., Cai W., Valentim C.C.S., Liang H., Baxter S.L., McKeown A., Yang G., Wu X., Yan F., Dong J., Prasadha M.K., Pei J., Ting M., Zhu J., Li C., Hewett S., Dong J., Ziyar I., Shi A., Zhang R., Zheng L., Hou R., Shi W., Fu X., Duan Y., Huu V.A.N., Wen C., Zhang E.D., Zhang C.L., Li O., Wang X., Singer M.A., Sun X., Xu J., Tafreshi A., Lewis M.A., Xia H., Zhang K. Retinal damage diagnostical analysis in humans - Methods
Kermany, D.S., Goldbaum M., Cai W., Valentim C.C.S., Liang H., Baxter S.L., McKeown A., Yang G., Wu X., Yan F., Dong J., Prasadha M.K., Pei J., Ting M., Zhu J., Li C., Hewett S., Dong J., Ziyar I., Shi A., Zhang R., Zheng L., Hou R., Shi W., Fu X., Duan Y., Huu V.A.N., Wen C., Zhang E.D., Zhang C.L., Li O., Wang X., Singer M.A., Sun X., Xu J., Tafreshi A., Lewis M.A., Xia H., Zhang K. - 2018
Hex maze: a new virtual maze able to track acquisition and usage of three navigation strategies
Authors: Spriggs, M.J., Kirk I.J., Skelton R.W. "Hex maze": new virtual maze to estimate spatial navigation in humans - Methods
Spriggs, M.J., Kirk I.J., Skelton R.W. - 2018
When neuroscience met clinical pathology: partitioning experimental variation to aid data interpretation in neuroscience
Authors: Jeffery, N.D., Bale S.T., Safayi S., Howard III M.A., Moon L., Jeffery U. Experimental variation and data interpretation in neuroscience - Methods
Jeffery, N.D., Bale S.T., Safayi S., Howard III M.A., Moon L., Jeffery U. - 2018
Towards an unconscious neural reinforcement intervention for common fears
Authors: Taschereau-Dumouchel, V., Cortese A., Chiba T., Knotts J.D., Kawato M., Lau H. Brain activity response to fear modulation in humans: psychotherapic anxiety disorder treatment efficacy control method by brain imaging/conditioned emotional response analysis
Taschereau-Dumouchel, V., Cortese A., Chiba T., Knotts J.D., Kawato M., Lau H. - 2018
Assessment of impulsivity in adolescent mice: a new training procedure for a 3-choice serial reation time task
Authors: Sasamori, H., Ohmura Y., Kubo T., Yoshida T., Yoshioka M. New operant reaction time training to test impulsivity in adolescent and adult mice - Methods
Sasamori, H., Ohmura Y., Kubo T., Yoshida T., Yoshioka M. - 2018
Preface: Special issue on measuring behaviour 2016
Authors: Riedel, G., Gurrin C., Spink A. Measuring behavior methods - Commentary
Riedel, G., Gurrin C., Spink A. - 2018