2019

Contained in: Curr. Op. Neurobiol., 2019: 55, 142-151

Towards neural co-processors for the brain: combining decoding and encoding in brain-computer interfaces

Authors: Rao, R.P.N.

  Bidirectional brain-computer interface processing - Review
  Rao, R.P.N. - 2019

  REVIEWS AND COMMENTARIES   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR   ELECTRIC/MAGNETIC CENTRAL NERVOUS SYSTEM STIMULATION   LOCOMOTOR ACTIVITY
Contained in: Curr. Op. Neurobiol., 2019: 55, 167-179

Interpreting encoding and decoding models

Authors: Kriegeskorte, N., Douglas P.K.

  Encoding and decoding models in brain-computational representantional interpretation - Review
  Kriegeskorte, N., Douglas P.K. - 2019

  REVIEWS AND COMMENTARIES   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR
Contained in: Curr. Op. Neurobiol., 2019: 55, 188-198

Convolutional nets for reconstructing neural circuits from brain images acquired by serial section electron microscopy

Authors: Lee, K., Turner N., Macrina T., Wu J., Lu R., Seung H.S.

  Electron microscopy image analysis and neural circuit reconstruction - Methods - Review
  Lee, K., Turner N., Macrina T., Wu J., Lu R., Seung H.S. - 2019

  REVIEWS AND COMMENTARIES   BRAIN IMAGING   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR   METHODS IN NEUROSCIENCE AND BEHAVIOR
Contained in: Curr. Op. Neurobiol., 2019: 55, 199-212

Connectal coding: discovering the structures linking cognitive phenotypes to individual histories

Authors: Vogelstein, J.T., Bridgeford E.W., Pedigo B.D., Chung J., Levin K., Mensh B., Priebe C.E.

  "Connectome" models, neural coding and network structure - Review
  Vogelstein, J.T., Bridgeford E.W., Pedigo B.D., Chung J., Levin K., Mensh B., Priebe C.E. - 2019

  REVIEWS AND COMMENTARIES   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR
Contained in: J. Neurosci. Methods, 2019: 323, 13-21

NIMH MonkeyLogic: behavioral control and data acquisition in MATLAB

Authors: Hwang, J., Mitz A.R., Murray E.A.

  "NIMH MonkeyLogic" computing MATLAB-based behavior analysis in operant conditioning programming/processing/analysing - Methods
  Hwang, J., Mitz A.R., Murray E.A. - 2019

  MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR   METHODS IN NEUROSCIENCE AND BEHAVIOR   OPERANT CONDITIONING   SCHEDULE INDUCED CONDITIONING AND BEHAVIOR
Contained in: J. Neurosci. Methods, 2019: 323, 68-76

Autoconnectivity: a new perspective on human brain function

Authors: Arbabshirani, M.R., Preda A., Vaidya J.G., Potkin S.G., Pearlson G., Voyvodic J., Mathalon D., van Erp T., Michael A., Kiehl K.A., Turner J.A., Calhoun V.D.

  Cognitive/mental state-dependent "autoconnectivity": fMRI autocorrelation to understand brain function in health and disease - Methods
  Arbabshirani, M.R., Preda A., Vaidya J.G., Potkin S.G., Pearlson G., Voyvodic J., Mathalon D., van Erp T., Michael A., Kiehl K.A., Turner J.A., Calhoun V.D. - 2019

  METHODS IN NEUROSCIENCE AND BEHAVIOR   BRAIN IMAGING   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR
Contained in: J. Neurosci. Methods, 2019: 323, 82-89

Towards an efficient segmentation of small rodents brain: a short ctitical review

Authors: Feo, R., Giove F.

  Neuro MRI mouse brain volume segmentation: multi-atlas labeling analysis and comparison - Review - Methods
  Feo, R., Giove F. - 2019

  REVIEWS AND COMMENTARIES   METHODS IN NEUROSCIENCE AND BEHAVIOR   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR   BRAIN IMAGING
Contained in: Neuron, 2019: 102, 918-928

Universal transform or multiple functionality? Understanding the contribution of the human cerebellum across task domains

Authors: Diedrichsen, J., King M., Hernandez-castillo C., Sereno M., Ivry R.B.

  Human cerebellar functional heterogeneity - Review
  Diedrichsen, J., King M., Hernandez-castillo C., Sereno M., Ivry R.B. - 2019

  REVIEWS AND COMMENTARIES   CEREBELLUM   BRAIN IMAGING   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR
Contained in: Proc. Natl. Acad. Sci. USA, 2019: 116, 12506-12515

Routing information flow by separate neural synchrony frequencies allows for "functionally labeled lines" in higher primate cortex

Authors: Khamechian, M.B., Kozyrev V., Treue S., Esghaei M., Daliri M.R.

  Visual cortex neuronal activity (spike-phase coupling) related to visual stimuli presentation in higher primate monkeys: high-gamma oscillation analysis and computational model study
  Khamechian, M.B., Kozyrev V., Treue S., Esghaei M., Daliri M.R. - 2019

  CEREBRAL CORTEX   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR   LUMINANCE AND VISION
Contained in: Nature, 2019: 570, 509-513

Specialized coding of sensory, motor and cognitive variables in VTA dopamine neurons

Authors: Engelhard, B., Finkelstein J., Cox J., Fleming W., Jang H.J., Ornelas S., Koay S.A., Thiberge S.Y., Daw N.D., Tank D.W., Witten I.B.

  Ventral tegmental area dopaminergic neuron activity related to Pavlovian/spatial-operant rewarded responding in mice
  Engelhard, B., Finkelstein J., Cox J., Fleming W., Jang H.J., Ornelas S., Koay S.A., Thiberge S.Y., Daw N.D., Tank D.W., Witten I.B. - 2019

  DOPAMINE   UNSPECIFIC ASCENDING ACTIVATING SYSTEM PROJECTION   CLASSICAL PAVLOVIAN CONDITIONING   SPATIAL ORIENTATION AND SPATIAL MEMORY   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR
Contained in: Behav. Processes, 2019: 164, 65-77

The bias of combining variables on fish's aggressive behavior studies

Authors: Noleto-Filho, E.M., Pennino M.G., Dos Santos Gauy A.C., Bolognesi M.C., Goncalves-de-Freitas E.

  Variable combination in evaluating aggressive behavior in different cichlids secies - Methods
  Noleto-Filho, E.M., Pennino M.G., Dos Santos Gauy A.C., Bolognesi M.C., Goncalves-de-Freitas E. - 2019

  AGGRESSIVE AND DEFENSIVE BEHAVIOR   ENVIRONMENT AND SOCIAL BEHAVIOR   METHODS IN NEUROSCIENCE AND BEHAVIOR   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR
Contained in: J. Physiol. (London), 2019: 597, 3473-3502

Intracellular calcium stores mediate metaplasticity at hippocampal dendritic spines

Authors: Mahajan, G., Nadkarni S.

  Endoplasmic reticulum role in hippocampal dendritic spine on glutamate and calcium signaling and related excitability computational model
  Mahajan, G., Nadkarni S. - 2019

  HIPPOCAMPUS, FORNIX AND SUBICULUM   N-METHYL-D-ASPARTATE (NMDA)   GLUTAMATE   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR   ELECTRIC/MAGNETIC CENTRAL NERVOUS SYSTEM STIMULATION
Contained in: Nat. Neurosci., 2019: 22, 1159-1167

Circuit mechanisms for the maintenance and manipulation of information in working memory

Authors: Masse, N.Y., Yang G.R., Song H.F., Wang X.-J., Freedman D.J.

  Persistent neuronal activity and short-term synaptic plasticity related to working memory process: computational model study
  Masse, N.Y., Yang G.R., Song H.F., Wang X.-J., Freedman D.J. - 2019

  MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR   NEUROGENESIS AND PLASTICITY
Contained in: Nat. Neurosci., 2019: 22, 1168-1181

A diversity of interneurons and Hebbian plasticity facilitate rapid compressible learning in the hippocampus

Authors: Nicola, W., Clopath C.

  Hippocampal theta phase and sharp wave-rippes related to spatial orientation: computational netwrok model study
  Nicola, W., Clopath C. - 2019

  MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR   HIPPOCAMPUS, FORNIX AND SUBICULUM   SPATIAL ORIENTATION AND SPATIAL MEMORY
Contained in: Neuron, 2019: 102, 1249-1258

Discrete stepping and nonlinear ramping dynamics underlie spiking responses of LIP neurons during decision-making

Authors: Zoltowski, D.M., Latimer K.W., Yates J.L., Huk A.C., Pillow J.W.

  Lateral intra-parietal area neuorn role related to decision-making in monkeys: experimental data analysis and ramping computational model study
  Zoltowski, D.M., Latimer K.W., Yates J.L., Huk A.C., Pillow J.W. - 2019

  CEREBRAL CORTEX   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR   OPERANT CONDITIONING
Contained in: Neuron, 2019: 103, 147-160

A flexible model of working memory

Authors: Bouchacourt, F., Buschman T.J.

  Working memory computational model
  Bouchacourt, F., Buschman T.J. - 2019

  MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR

2018

Contained in: Biol. Psychol., 2018: 131, 54-62

No haste, more taste: an EMA study of the effects of stress, negative and positive emotions on eating behavior

Authors: Reichenberger, J., Kuppens P., Liedlgruber M., Wilhelm F.H., Tiefengrabner M., Ginzinger S., Blechert J.

  Stress, emotions and eating behavior in humans
  Reichenberger, J., Kuppens P., Liedlgruber M., Wilhelm F.H., Tiefengrabner M., Ginzinger S., Blechert J. - 2018

  FEEDING AND DRINKING   TASTE   STRESS   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR
Contained in: Nat. Rev. Neurosci., 2018: 19, 17-33

Communication dynamics in complex brain networks

Authors: Avena-Koenigsberger, A., Misic B., Sporns O.

  Brain network dynamics and communication - Review
  Avena-Koenigsberger, A., Misic B., Sporns O. - 2018

  REVIEWS AND COMMENTARIES   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR   BRAIN IMAGING
Contained in: Hippocampus, 2018: 28, 53-66

Prediciting episodic and spatial memory performance from hippocampal resting-state functional connectivity: evidence for an anterior-posterior division of function

Authors: Persson, J., Stening E., Nordin K., Soderlund H.

  Hippocampal resting-state functional connectivity related to episodic and spatial memory performance in humans
  Persson, J., Stening E., Nordin K., Soderlund H. - 2018

  HIPPOCAMPUS, FORNIX AND SUBICULUM   BRAIN IMAGING   LATERALITY AND ASYMMETRICAL INTERVENTIONS   SPATIAL ORIENTATION AND SPATIAL MEMORY   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR
Contained in: Behav. Brain Res., 2018: 338, 101-108

US alone trials presented during acquisition do not disrupt classical eyeblink conditioning: empirical and computational findings

Authors: Allen, M.T., Myers C.E., Williams D., Servatius R.J.

  Unconditioned stimulus alone presentation on classical eyeblink conditioning in humans: empirical and computational model study
  Allen, M.T., Myers C.E., Williams D., Servatius R.J. - 2018

  CLASSICAL PAVLOVIAN CONDITIONING   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR   CEREBELLUM   HIPPOCAMPUS, FORNIX AND SUBICULUM   CONDITIONED AND UNCONDITIONED INHIBITION
Contained in: Behav. Processes, 2018: 147, 48-60

Foraging motivation favors the occurence of Levy walks

Authors: Anselme, P., Otto T., Gunturkun O.

  Foraging motivation on "Levy walks" behavior: a computational simulation study
  Anselme, P., Otto T., Gunturkun O. - 2018

  MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR   FEEDING AND DRINKING   EXPLORATORY ACTIVITY
Contained in: Biol. Psychol., 2018: 132, 81-90

Hierarchical Bayesian models for the autonomic-based concealed information test

Authors: Shibuya, Y., Okada K., Ogawa T., Matsuda I., Tsuneoka M.

  "Concealed information test" validation by hierarchical Bayesian modeling application in humans
  Shibuya, Y., Okada K., Ogawa T., Matsuda I., Tsuneoka M. - 2018

  MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR   ENVIRONMENT AND SOCIAL BEHAVIOR
Contained in: J. Neurosci. Methods, 2018: 293, 6-16

The CS algorithm: anovel method for high frequency oscillation detection in EEG

Authors: Cimbalnik, J., Hewitt A., Worrell G., Stead M.

  CS algorithm to detect electroencephalographic high frequency oscillation - Methods
  Cimbalnik, J., Hewitt A., Worrell G., Stead M. - 2018

  METHODS IN NEUROSCIENCE AND BEHAVIOR   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR   CEREBRAL CORTEX
Contained in: J. Neurosci. Methods, 2018: 293, 97-104

StimTrack: an open-source software for manual trascranial magnetic stimulation coil positioning

Authors: Ambrosini, E., Ferrante S., van de Ruit M., Biguzzi S., Colombo V., Monticone M., Ferriero G., Pedrocchi A., Ferrigno G., Grey M.J.

  "Stim Track" software for transcranial magnetic stimulation in primates - Methods
  Ambrosini, E., Ferrante S., van de Ruit M., Biguzzi S., Colombo V., Monticone M., Ferriero G., Pedrocchi A., Ferrigno G., Grey M.J. - 2018

  ELECTRIC/MAGNETIC CENTRAL NERVOUS SYSTEM STIMULATION   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR   METHODS IN NEUROSCIENCE AND BEHAVIOR
Contained in: J. Neurosci. Methods, 2018: 293, 105-116

Stereotaxic 18F-FDG PET and MRI templates with three-dimensional digital atlas for statostical parametric mapping analysis of tree shrew brain

Authors: Huang, Q., Nie B., Ma C., Wang J., Zhang T., Duan S., Wu S., Liang S., Li P., Liu H., Sun H., Zhou J., Xu L., Shan B.

  By means positron emission tomography/magnetic resonance imaging stereotaxic atlas for shrews - Methods
  Huang, Q., Nie B., Ma C., Wang J., Zhang T., Duan S., Wu S., Liang S., Li P., Liu H., Sun H., Zhou J., Xu L., Shan B. - 2018

  BRAIN IMAGING   METHODS IN NEUROSCIENCE AND BEHAVIOR   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR
Contained in: J. Neurosci. Methods, 2018: 293, 183-190

A 3D-printed modular device for imaging the brain of small birds

Authors: Lattin, C.R., Emerson M.A., Gallezot J.-D., Mulnix T., Brown J.E., Carson R.E.

  3D-printed modul device for small birds brain imaging - Methods
  Lattin, C.R., Emerson M.A., Gallezot J.-D., Mulnix T., Brown J.E., Carson R.E. - 2018

  METHODS IN NEUROSCIENCE AND BEHAVIOR   BRAIN IMAGING   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR
Contained in: J. Neurosci. Methods, 2018: 293, 254-263

A hierarchical structure for human behavior classification using STN local field potentials

Authors: Golshan, H.M., Hebb A.O., Hanrahan S.J., Nedrud J., Mahoor M.H.

  Sub-thalamic nucelus local field potentials to estimate human motor behavior - Methods
  Golshan, H.M., Hebb A.O., Hanrahan S.J., Nedrud J., Mahoor M.H. - 2018

  STRIATUM   METHODS IN NEUROSCIENCE AND BEHAVIOR   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR
Contained in: J. Neurosci. Methods, 2018: 293, 375-388

An improved procedure for integrated behavioral z-scoring illustrated with modified Hole Board behavior of male inbred laboratory mice

Authors: Labots, M., Laarakker M.C., Schetters D., Arndt S.S., van Lith H.A.

  Calculating integrated z-scores to measuring mouse behavior - Methods
  Labots, M., Laarakker M.C., Schetters D., Arndt S.S., van Lith H.A. - 2018

  GLUCOCORTICOIDS   EXPLORATORY ACTIVITY   METHODS IN NEUROSCIENCE AND BEHAVIOR   STRAIN   DARK/LIGHT CONTEXT   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR
Contained in: J. Neurosci. Methods, 2018: 294, 40-50

A new rat-compatible robotic framework for spatial navigation behavioral experiments

Authors: Gianelli, S., Harland B., Fellous J.-M.

  Robotic framework for rat spatial navigation analysis - Methods
  Gianelli, S., Harland B., Fellous J.-M. - 2018

  SPATIAL ORIENTATION AND SPATIAL MEMORY   METHODS IN NEUROSCIENCE AND BEHAVIOR   MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR   HIPPOCAMPUS, FORNIX AND SUBICULUM
Contained in: Behav. Processes, 2018: 147, 33-37

Is state-dependent valuation more adaptive than simpler rules?

Authors: Halpern, J.Y., Seeman L.

  Animal behavior related to environmental condition performing and expecting
  Halpern, J.Y., Seeman L. - 2018

  MATHEMATICAL ANALYSIS APPLIED TO BEHAVIOR   BODY TEMPERATURE