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2019
Studies on long term behavioural changes in gruop-housed rat models of barin and spinal corcd injury using an automated home cage recording system
Authors: Yip, P.K., Chapman G.E., Sillito R.R., Ip T.H.R., Akhigbe G., Becker S.C., Price A.W., Mizìchael-Titus A.T., Armstrong J.D., Tremoleda J.L. Automated home cage recording system to valuate brain and spinal cord injury induced behavioral changes in rats - Methods
Yip, P.K., Chapman G.E., Sillito R.R., Ip T.H.R., Akhigbe G., Becker S.C., Price A.W., Mizìchael-Titus A.T., Armstrong J.D., Tremoleda J.L. - 2019
DOSED: a deep learning approach to detect multiple sleep micro-events in EEG signal
Authors: Chambon, S., Thorey V., Arnal P.J., Mignot E., Gramfort A. Sleep EEG micro-event detection by multiple automatic algorhythms: DOSED deep learning approach - Methods
Chambon, S., Thorey V., Arnal P.J., Mignot E., Gramfort A. - 2019
MarmoDetector: anovel 3D automated system for the quantitative assessment of marmoset behavior
Authors: Yabumoto, T., Yoshida F., Miyauchi H., Baba K., Tsuda H., Ikenaka K., Hayakawa H., Koyabu N., Hamanaka H., Papa S.M., Hirata M., Mochizuki H. 3D automated circadian activity quantitative analysis system for marmoset monkeys - Methods
Yabumoto, T., Yoshida F., Miyauchi H., Baba K., Tsuda H., Ikenaka K., Hayakawa H., Koyabu N., Hamanaka H., Papa S.M., Hirata M., Mochizuki H. - 2019
All-optical spoiking neurosynaptic networks with self-learning capabilities
Authors: Feldmann, J., Youngblood N., Wright C.D., Bhaskaran H., Pernice W.H.P. Neurosynaptic system all-optical version model: self-learning capable photonic neurosynaptic network - Methods
Feldmann, J., Youngblood N., Wright C.D., Bhaskaran H., Pernice W.H.P. - 2019
Voltage imaging and optogenetics reveal behaviour-dependent changes in hippocampal dynamics
Authors: Adam, Y., Kim J.J., Lou S., Zhao Y., Xie M.E., Brinks D., Wu H., Mostajo-Radji M.A., Kheifets S., Parot V., Chettih S., Williams K.J., Gmeiner B., Farhi S.L., Madisen L., Buchanan E.K., Kinsella I., Zhou D., Paninski L., Harvey C.D., Zeng H., Arlotta P., Campbell R.E., Cohen A.E. Hippocampal multiple neurons simujltaneous in vivo voltage dynamic recording of behaving mice: near-infrared/high-speed microscope/targeted gene expression technique - Methods
Adam, Y., Kim J.J., Lou S., Zhao Y., Xie M.E., Brinks D., Wu H., Mostajo-Radji M.A., Kheifets S., Parot V., Chettih S., Williams K.J., Gmeiner B., Farhi S.L., Madisen L., Buchanan E.K., Kinsella I., Zhou D., Paninski L., Harvey C.D., Zeng H., Arlotta P., Campbell R.E., Cohen A.E. - 2019
Novel electrode technologies foir neural recordings
Authors: Hong, G., Lieber C.M. Neural recording electrode technologies in neuroscience reasearch - Review
Hong, G., Lieber C.M. - 2019
New evidence for refinement of anesthetic choice in procedures preceding the forced swimming test and the elevated plus-maze
Authors: Herbst, L.S., Gaigher T., Siqueira A.A., Joca S.R.L., Sampaio K.N., Beijamini V. General anesthesia effects on subsequent response to stress and exploratory behaviors in rats: anesthetic choice study - Methods
Herbst, L.S., Gaigher T., Siqueira A.A., Joca S.R.L., Sampaio K.N., Beijamini V. - 2019
Computational processing of neural recordings from calcium imaging data
Authors: Stringer, C., Pachitariu M. Calcium imaging computational processing related to neuronal activity - Methods - Review
Stringer, C., Pachitariu M. - 2019
Convolutional nets for reconstructing neural circuits from brain images acquired by serial section electron microscopy
Authors: Lee, K., Turner N., Macrina T., Wu J., Lu R., Seung H.S. Electron microscopy image analysis and neural circuit reconstruction - Methods - Review
Lee, K., Turner N., Macrina T., Wu J., Lu R., Seung H.S. - 2019
A hybrid convolutional and recurrent neural network for hippocampus analysis in Alzheimer's disease
Authors: Li, F., Liu M., the Alzeimer's Disease Neuroimaging Initiative Hippocampal MRI neural network analysis centered on Alzheimer's disease diagnosis - Methods
Li, F., Liu M., the Alzeimer's Disease Neuroimaging Initiative - 2019
NIMH MonkeyLogic: behavioral control and data acquisition in MATLAB
Authors: Hwang, J., Mitz A.R., Murray E.A. "NIMH MonkeyLogic" computing MATLAB-based behavior analysis in operant conditioning programming/processing/analysing - Methods
Hwang, J., Mitz A.R., Murray E.A. - 2019
A flexible geometry for panoramic visual and optogenetic stimulation during behavior and physiology
Authors: Creamer, M.S., Mano O., Tanaka R., Clark D.A. Panoramic visual environmental equipment adapted to optogenetic stimulation for Drosophila and beyond insects - Methods
Creamer, M.S., Mano O., Tanaka R., Clark D.A. - 2019
Autoconnectivity: a new perspective on human brain function
Authors: Arbabshirani, M.R., Preda A., Vaidya J.G., Potkin S.G., Pearlson G., Voyvodic J., Mathalon D., van Erp T., Michael A., Kiehl K.A., Turner J.A., Calhoun V.D. Cognitive/mental state-dependent "autoconnectivity": fMRI autocorrelation to understand brain function in health and disease - Methods
Arbabshirani, M.R., Preda A., Vaidya J.G., Potkin S.G., Pearlson G., Voyvodic J., Mathalon D., van Erp T., Michael A., Kiehl K.A., Turner J.A., Calhoun V.D. - 2019
A wireless miniScope for deep brain imaging in freely moving mice
Authors: Barbera, G., Liang B., Zhang L., Li Y., Lin D.-T. Deep brain imaging in freely moving mice - Methods
Barbera, G., Liang B., Zhang L., Li Y., Lin D.-T. - 2019
Towards an efficient segmentation of small rodents brain: a short ctitical review
Authors: Feo, R., Giove F. Neuro MRI mouse brain volume segmentation: multi-atlas labeling analysis and comparison - Review - Methods
Feo, R., Giove F. - 2019
Existence of working memory in teleosts: establishemnt of the delayed matching-to-sample task in adult zebrafish
Authors: Bloch, S., Froc C., Pontiggia A., Yamamoto K. Appetitive rewarded delayed matching-to-sample task in zebrafishes - Methods
Bloch, S., Froc C., Pontiggia A., Yamamoto K - 2019
Therapeutic monitoring and prediction of the efficacy of neurotrophic therapy in patients with amnesitic-type mild cognitive decline syndrome
Authors: Gavrilova, S.I., Volpina O.M., Kolykhalov I.V., Fedorova Ya.B., Selezneva N.D., Ponomareva E.V., Koroev D.O., Kamynina A.V. Cerebrolysin treatment on amnestic-type mild cognitive decline syndrome: p75 neurotrophin receptor levekls as therapeutic monitoring and efficacy prediction - Methods
Gavrilova, S.I., Volpina O.M., Kolykhalov I.V., Fedorova Ya.B., Selezneva N.D., Ponomareva E.V., Koroev D.O., Kamynina A.V. - 2019
The bias of combining variables on fish's aggressive behavior studies
Authors: Noleto-Filho, E.M., Pennino M.G., Dos Santos Gauy A.C., Bolognesi M.C., Goncalves-de-Freitas E. Variable combination in evaluating aggressive behavior in different cichlids secies - Methods
Noleto-Filho, E.M., Pennino M.G., Dos Santos Gauy A.C., Bolognesi M.C., Goncalves-de-Freitas E. - 2019
High fidelity: assessing zebrafish (Danio rerio) responses to social stimuli across severale levels of realism
Authors: Velkey, A.J., Boles J., Betts T.K., Kay H., Henenlotter R., Wiens K.M. Locomotion/exploration assessment in a new "four quadrat choice preference task" for zebrafishes - Methods
Velkey, A.J., Boles J., Betts T.K., Kay H., Henenlotter R., Wiens K.M. - 2019
Residual avoidance: a new, consistent and repeatable readout of chronic stress-induced conflict anxiety reversible by antidepressant treatment
Authors: Prevot, T.D., Misquitta K.A., Fee C., Newton D.F., Chatterjee D., Nikolova Y.S., Sibille E., Banasr M. Chronic restraint/impredictable stress exposure effects measurement new method in male and female mice: "residual avoidance" behavior extimation - Methods
Prevot, T.D., Misquitta K.A., Fee C., Newton D.F., Chatterjee D., Nikolova Y.S., Sibille E., Banasr M. - 2019
2018
Evidence-based severity assessment: impact of repeated versus single open-filed testing on welfare in C57BL/6J mice
Authors: Bodden, C., Siestrup S., Palme R., Kaiser S., Sachser N., Richter S.H. Locomotion/exploration in open field elevated plus maze and related corticosterone levels in mice: repeated versus single testing - Methods
Bodden, C., Siestrup S., Palme R., Kaiser S., Sachser N., Richter S.H. - 2018
Sequence-specific implicit motor learning using whole-arm three-dimensional reach movements
Authors: Baird, J., Stewart J.C. Novel sequence-specific implicit motor learning in humans - Methods
Baird, J., Stewart J.C. - 2018
The CS algorithm: anovel method for high frequency oscillation detection in EEG
Authors: Cimbalnik, J., Hewitt A., Worrell G., Stead M. CS algorithm to detect electroencephalographic high frequency oscillation - Methods
Cimbalnik, J., Hewitt A., Worrell G., Stead M. - 2018
Proximity as a predictor of social behavior in rats
Authors: Bonuti, R., Morato S. Rat social behavior estimating new method - Methods
Bonuti, R., Morato S. - 2018
StimTrack: an open-source software for manual trascranial magnetic stimulation coil positioning
Authors: Ambrosini, E., Ferrante S., van de Ruit M., Biguzzi S., Colombo V., Monticone M., Ferriero G., Pedrocchi A., Ferrigno G., Grey M.J. "Stim Track" software for transcranial magnetic stimulation in primates - Methods
Ambrosini, E., Ferrante S., van de Ruit M., Biguzzi S., Colombo V., Monticone M., Ferriero G., Pedrocchi A., Ferrigno G., Grey M.J. - 2018
Stereotaxic 18F-FDG PET and MRI templates with three-dimensional digital atlas for statostical parametric mapping analysis of tree shrew brain
Authors: Huang, Q., Nie B., Ma C., Wang J., Zhang T., Duan S., Wu S., Liang S., Li P., Liu H., Sun H., Zhou J., Xu L., Shan B. By means positron emission tomography/magnetic resonance imaging stereotaxic atlas for shrews - Methods
Huang, Q., Nie B., Ma C., Wang J., Zhang T., Duan S., Wu S., Liang S., Li P., Liu H., Sun H., Zhou J., Xu L., Shan B. - 2018
A 3D-printed modular device for imaging the brain of small birds
Authors: Lattin, C.R., Emerson M.A., Gallezot J.-D., Mulnix T., Brown J.E., Carson R.E. 3D-printed modul device for small birds brain imaging - Methods
Lattin, C.R., Emerson M.A., Gallezot J.-D., Mulnix T., Brown J.E., Carson R.E. - 2018
A hierarchical structure for human behavior classification using STN local field potentials
Authors: Golshan, H.M., Hebb A.O., Hanrahan S.J., Nedrud J., Mahoor M.H. Sub-thalamic nucelus local field potentials to estimate human motor behavior - Methods
Golshan, H.M., Hebb A.O., Hanrahan S.J., Nedrud J., Mahoor M.H. - 2018
PLDT (planarian light/dark test): an invertebrate assay to quantify defensive responding and study anxiety-like effects
Authors: Zewde, A.M., Yu F., Nayak S., Tallarida C., Reitz A.B., Kirby L.G., Rawls S.M. Light/dark preference test in planarians - Methods
Zewde, A.M., Yu F., Nayak S., Tallarida C., Reitz A.B., Kirby L.G., Rawls S.M. - 2018
Comparative one- and two-photon uncaging of MNI-glutamte and NMI-kainate on hippocampal CA1 neurons
Authors: Passlick, S., Ellis-Davies G.C.R. One- or two-photon uncaging of 4-methoxy-7-nitroindolinyl (MNI)-glutamate or 4-methoxy-7-nitroindolinyl (MNI)-kainate on hippocampal neuron excitability - Methods
Passlick, S., Ellis-Davies G.C.R. - 2018